Neko  0.7.2
A portable framework for high-order spectral element flow simulations
Simulation components

What are simulation components?

Simulation components, or simcomps fo short, incapsulate additional functionality that may be useful for certain cases but not necessary to run the solver. This can include computation and output of additional fields, in-situ post-processing operations, data sampling, etc.

By design, simulation components can tap into every aspect of the simulation, so they can be quite powerful. As the code grows, we expect to add more and more simcomps to the code.

Adding simulation components to the case

Each simcomp is defined as a single JSON object at are added to an array of objects called simulation_components, which resides directly under the case object.

Controling execution and file output

Each simulation component is, by default, executed once per time step to perform associated computations and output. However, this can be modified by using the compute_control and compute_value parameters for the computation and the output_control and and output_value for the output to disk. The paramters for the _control values are the same as for the fluid and checkpointing.

For example, in the tgv example case the vorticity component is executed once per 50 time steps.

{
"type": "vorticity",
"compute_control": "tsteps",
"compute_value": 50
}

If no parameters for the output_ parametersare provided, they areset to be the same as for compute_.

List of simulation components

vorticity

Computes the vorticity field an stores in the field registry as omega_x, omega_y and omega_z. Currently produces no output.

lambda2

Computes \( \lambda_2 \) for the velocity field and stores it in the normal output files as the first unused field. This means that \( \lambda_2 \) can be found in the temeprature field in then fld files if running without a scalar and s1 if neko is run with one scalar.

probes

Probes selected solution fields at the points given inside an input file. Example usage:

{
"type": "probes",
"compute_control": "simulationtime",
"compute_value" : 1,
"points_file": "probes.csv",
"output_file": "output.csv",
"fields": ["w","s"]
}

This probes the fields 'w', and 's' in the points described by points.csv and outputs into output.csv every 1 time units.