254 subroutine fluid_pnpn_init(this, msh, lx, params, user, chkp)
255 class(fluid_pnpn_t),
target,
intent(inout) :: this
256 type(
mesh_t),
target,
intent(inout) :: msh
257 integer,
intent(in) :: lx
258 type(json_file),
target,
intent(inout) :: params
259 type(
user_t),
target,
intent(in) :: user
260 type(
chkp_t),
target,
intent(inout) :: chkp
261 character(len=15),
parameter :: scheme =
'Modular (Pn/Pn)'
263 class(
bc_t),
pointer :: bc_i, vel_bc
264 real(kind=
rp) :: abs_tol
265 character(len=LOG_SIZE) :: log_buf
266 integer :: ierr, integer_val, solver_maxiter
267 character(len=:),
allocatable :: solver_type, precon_type
268 logical :: monitor, found
270 type(json_file) :: numerics_params, precon_params
275 call this%init_base(msh, lx, params, scheme,
user, .true.)
287 allocate(this%ext_bdf)
288 call this%ext_bdf%init(integer_val)
291 this%full_stress_formulation, .false.)
295 call this%c_Xh%generate_cyclic_bc()
297 if (this%full_stress_formulation)
then
299 call ax_helm_factory(this%Ax_vel, full_formulation = .true.)
302 call pnpn_prs_res_stress_factory(this%prs_res)
305 call pnpn_vel_res_stress_factory(this%vel_res)
308 call ax_helm_factory(this%Ax_vel, full_formulation = .false.)
311 call pnpn_prs_res_factory(this%prs_res)
314 call pnpn_vel_res_factory(this%vel_res)
319 if (params%valid_path(
'case.fluid.nut_field'))
then
320 if (.not. this%full_stress_formulation)
then
321 call neko_error(
"You need to set full_stress_formulation to " // &
322 "true for the fluid to have a spatially varying " // &
325 call json_get(params,
'case.fluid.nut_field', this%nut_field_name)
327 this%nut_field_name =
""
331 call ax_helm_factory(this%Ax_prs, full_formulation = .false.)
335 call rhs_maker_sumab_fctry(this%sumab)
338 call rhs_maker_ext_fctry(this%makeabf)
341 call rhs_maker_bdf_fctry(this%makebdf)
344 call rhs_maker_oifs_fctry(this%makeoifs)
347 associate(xh_lx => this%Xh%lx, xh_ly => this%Xh%ly, xh_lz => this%Xh%lz, &
348 dm_xh => this%dm_Xh, nelv => this%msh%nelv)
350 call this%p_res%init(dm_xh,
"p_res")
351 call this%u_res%init(dm_xh,
"u_res")
352 call this%v_res%init(dm_xh,
"v_res")
353 call this%w_res%init(dm_xh,
"w_res")
354 call this%abx1%init(dm_xh,
"abx1")
355 call this%aby1%init(dm_xh,
"aby1")
356 call this%abz1%init(dm_xh,
"abz1")
357 call this%abx2%init(dm_xh,
"abx2")
358 call this%aby2%init(dm_xh,
"aby2")
359 call this%abz2%init(dm_xh,
"abz2")
360 call this%advx%init(dm_xh,
"advx")
361 call this%advy%init(dm_xh,
"advy")
362 call this%advz%init(dm_xh,
"advz")
365 call this%du%init(this%dm_Xh,
'du')
366 call this%dv%init(this%dm_Xh,
'dv')
367 call this%dw%init(this%dm_Xh,
'dw')
368 call this%dp%init(this%dm_Xh,
'dp')
370 call this%ale%init(this%c_Xh, params,
user, chkp)
372 call neko_log%section(
"Fluid boundary conditions")
374 call this%setup_bcs(
user, params)
378 if (found)
call this%write_boundary_conditions()
381 call this%proj_prs%init(this%dm_Xh%size(), this%pr_projection_dim, &
382 this%pr_projection_activ_step, &
383 this%pr_projection_reorthogonalize_basis)
385 call this%proj_vel%init(this%dm_Xh%size(), this%vel_projection_dim, &
386 this%vel_projection_activ_step)
392 if (params%valid_path(
'case.fluid.flow_rate_force'))
then
393 call this%vol_flow%init(this%dm_Xh, params)
397 call neko_log%section(
"Pressure solver")
400 'case.fluid.pressure_solver.max_iterations', &
402 call json_get(params,
'case.fluid.pressure_solver.type', solver_type)
403 call json_get(params,
'case.fluid.pressure_solver.preconditioner.type', &
406 'case.fluid.pressure_solver.preconditioner', precon_params)
408 'case.fluid.pressure_solver.absolute_tolerance', &
412 call neko_log%message(
'Type : ('// trim(solver_type) // &
413 ', ' // trim(precon_type) //
')')
414 write(log_buf,
'(A,ES13.6)')
'Abs tol :', abs_tol
417 call this%solver_factory(this%ksp_prs, this%dm_Xh%size(), &
418 solver_type, solver_maxiter, abs_tol, monitor)
419 call this%precon_factory_(this%pc_prs, this%ksp_prs, &
420 this%c_Xh, this%dm_Xh, this%gs_Xh, this%bcs_prs, &
421 precon_type, precon_params)
426 call json_get(params,
'case.numerics', numerics_params)
427 call advection_factory(this%adv, numerics_params, this%c_Xh, &
428 this%ulag, this%vlag, this%wlag, &
429 chkp%dtlag, chkp%tlag, this%ext_bdf, &
434 call this%chkp%add_fluid(this%u, this%v, this%w, this%p)
436 this%chkp%abx1 => this%abx1
437 this%chkp%abx2 => this%abx2
438 this%chkp%aby1 => this%aby1
439 this%chkp%aby2 => this%aby2
440 this%chkp%abz1 => this%abz1
441 this%chkp%abz2 => this%abz2
442 call this%chkp%add_lag(this%ulag, this%vlag, this%wlag)
446 this%schwarz_iterations, 0)
450 nullify(bc_i, vel_bc)
454 subroutine fluid_pnpn_restart(this, chkp)
455 class(fluid_pnpn_t),
target,
intent(inout) :: this
456 type(chkp_t),
intent(inout) :: chkp
457 real(kind=rp) :: dtlag(10), tlag(10)
463 n = this%u%dof%size()
464 if (
allocated(chkp%previous_mesh%elements) .or. &
465 chkp%previous_Xh%lx .ne. this%Xh%lx)
then
466 associate(u => this%u, v => this%v, w => this%w, p => this%p, &
467 c_xh => this%c_Xh, ulag => this%ulag, vlag => this%vlag, &
469 do concurrent(j = 1:n)
470 u%x(j,1,1,1) = u%x(j,1,1,1) * c_xh%mult(j,1,1,1)
471 v%x(j,1,1,1) = v%x(j,1,1,1) * c_xh%mult(j,1,1,1)
472 w%x(j,1,1,1) = w%x(j,1,1,1) * c_xh%mult(j,1,1,1)
473 p%x(j,1,1,1) = p%x(j,1,1,1) * c_xh%mult(j,1,1,1)
475 do i = 1, this%ulag%size()
476 do concurrent(j = 1:n)
477 ulag%lf(i)%x(j,1,1,1) = ulag%lf(i)%x(j,1,1,1) &
479 vlag%lf(i)%x(j,1,1,1) = vlag%lf(i)%x(j,1,1,1) &
481 wlag%lf(i)%x(j,1,1,1) = wlag%lf(i)%x(j,1,1,1) &
488 if (neko_bcknd_device .eq. 1)
then
489 associate(u => this%u, v => this%v, w => this%w, &
490 ulag => this%ulag, vlag => this%vlag, wlag => this%wlag,&
492 call device_memcpy(u%x, u%x_d, u%dof%size(), &
493 host_to_device, sync = .false.)
494 call device_memcpy(v%x, v%x_d, v%dof%size(), &
495 host_to_device, sync = .false.)
496 call device_memcpy(w%x, w%x_d, w%dof%size(), &
497 host_to_device, sync = .false.)
498 call device_memcpy(p%x, p%x_d, p%dof%size(), &
499 host_to_device, sync = .false.)
500 call device_memcpy(ulag%lf(1)%x, ulag%lf(1)%x_d, &
501 u%dof%size(), host_to_device, sync = .false.)
502 call device_memcpy(ulag%lf(2)%x, ulag%lf(2)%x_d, &
503 u%dof%size(), host_to_device, sync = .false.)
505 call device_memcpy(vlag%lf(1)%x, vlag%lf(1)%x_d, &
506 v%dof%size(), host_to_device, sync = .false.)
507 call device_memcpy(vlag%lf(2)%x, vlag%lf(2)%x_d, &
508 v%dof%size(), host_to_device, sync = .false.)
510 call device_memcpy(wlag%lf(1)%x, wlag%lf(1)%x_d, &
511 w%dof%size(), host_to_device, sync = .false.)
512 call device_memcpy(wlag%lf(2)%x, wlag%lf(2)%x_d, &
513 w%dof%size(), host_to_device, sync = .false.)
514 call device_memcpy(this%abx1%x, this%abx1%x_d, &
515 w%dof%size(), host_to_device, sync = .false.)
516 call device_memcpy(this%abx2%x, this%abx2%x_d, &
517 w%dof%size(), host_to_device, sync = .false.)
518 call device_memcpy(this%aby1%x, this%aby1%x_d, &
519 w%dof%size(), host_to_device, sync = .false.)
520 call device_memcpy(this%aby2%x, this%aby2%x_d, &
521 w%dof%size(), host_to_device, sync = .false.)
522 call device_memcpy(this%abz1%x, this%abz1%x_d, &
523 w%dof%size(), host_to_device, sync = .false.)
524 call device_memcpy(this%abz2%x, this%abz2%x_d, &
525 w%dof%size(), host_to_device, sync = .false.)
526 call device_memcpy(this%advx%x, this%advx%x_d, &
527 w%dof%size(), host_to_device, sync = .false.)
528 call device_memcpy(this%advy%x, this%advy%x_d, &
529 w%dof%size(), host_to_device, sync = .false.)
530 call device_memcpy(this%advz%x, this%advz%x_d, &
531 w%dof%size(), host_to_device, sync = .false.)
538 if (
allocated(chkp%previous_mesh%elements) &
539 .or. chkp%previous_Xh%lx .ne. this%Xh%lx)
then
541 call rotate_cyc(this%u, this%v, this%w, 1, this%c_Xh)
542 call this%gs_Xh%op(this%u, gs_op_add)
543 call this%gs_Xh%op(this%v, gs_op_add)
544 call this%gs_Xh%op(this%w, gs_op_add)
545 call this%gs_Xh%op(this%p, gs_op_add)
546 call rotate_cyc(this%u, this%v, this%w, 0, this%c_Xh)
548 do i = 1, this%ulag%size()
549 call rotate_cyc(this%ulag%lf(i), this%vlag%lf(i), &
550 this%wlag%lf(i), 1, this%c_Xh)
551 call this%gs_Xh%op(this%ulag%lf(i), gs_op_add)
552 call this%gs_Xh%op(this%vlag%lf(i), gs_op_add)
553 call this%gs_Xh%op(this%wlag%lf(i), gs_op_add)
554 call rotate_cyc(this%ulag%lf(i), this%vlag%lf(i), &
555 this%wlag%lf(i), 0, this%c_Xh)
559 call this%ale%sync_chkp(this%c_Xh, this%Xh, this%adv, chkp, this%gs_Xh)
666 subroutine fluid_pnpn_step(this, time, dt_controller)
667 class(fluid_pnpn_t),
target,
intent(inout) :: this
668 type(time_state_t),
intent(in) :: time
669 type(time_step_controller_t),
intent(in) :: dt_controller
673 type(ksp_monitor_t) :: ksp_results(4)
676 type(file_t) :: dump_file
677 class(bc_t),
pointer :: bc_i
678 type(non_normal_t),
pointer :: bc_j
680 if (this%freeze)
return
682 n = this%dm_Xh%size()
684 call profiler_start_region(
'Fluid', 1)
685 associate(u => this%u, v => this%v, w => this%w, p => this%p, &
686 u_e => this%u_e, v_e => this%v_e, w_e => this%w_e, &
687 du => this%du, dv => this%dv, dw => this%dw, dp => this%dp, &
688 u_res => this%u_res, v_res => this%v_res, w_res => this%w_res, &
689 p_res => this%p_res, ax_vel => this%Ax_vel, ax_prs => this%Ax_prs, &
691 c_xh => this%c_Xh, dm_xh => this%dm_Xh, gs_xh => this%gs_Xh, &
692 ulag => this%ulag, vlag => this%vlag, wlag => this%wlag, &
693 msh => this%msh, prs_res => this%prs_res, &
694 source_term => this%source_term, vel_res => this%vel_res, &
695 sumab => this%sumab, makeoifs => this%makeoifs, &
696 makeabf => this%makeabf, makebdf => this%makebdf, &
697 vel_projection_dim => this%vel_projection_dim, &
698 pr_projection_dim => this%pr_projection_dim, &
700 rho => this%rho, mu_tot => this%mu_tot, &
701 f_x => this%f_x, f_y => this%f_y, f_z => this%f_z, &
702 t => time%t, tstep => time%tstep, dt => time%dt, &
703 ext_bdf => this%ext_bdf, event => glb_cmd_event, &
707 call sumab%compute_fluid(u_e, v_e, w_e, u, v, w, &
708 ulag, vlag, wlag, ext_bdf%advection_coeffs%x, ext_bdf%nadv)
711 call this%source_term%compute(time)
714 call this%bcs_vel%apply_vector(f_x%x, f_y%x, f_z%x, &
715 this%dm_Xh%size(), time, strong = .false.)
717 if (this%ale%active)
then
719 call neko_error(
"ALE is not yet supported " // &
720 "with OIFS time integration.")
723 call this%adv%compute_ale(u, v, w, &
724 ale%wm_x, ale%wm_y, ale%wm_z, &
726 xh, c_xh, dm_xh%size())
732 call this%adv%compute(u, v, w, &
733 this%advx, this%advy, this%advz, &
734 xh, this%c_Xh, dm_xh%size(), dt)
741 call makeabf%compute_fluid(this%abx1, this%aby1, this%abz1,&
742 this%abx2, this%aby2, this%abz2, &
743 f_x%x, f_y%x, f_z%x, &
744 rho%x(1,1,1,1), ext_bdf%advection_coeffs%x, n)
747 call makeoifs%compute_fluid(this%advx%x, this%advy%x, this%advz%x, &
748 f_x%x, f_y%x, f_z%x, &
749 rho%x(1,1,1,1), dt, n)
752 call this%adv%compute(u, v, w, &
754 xh, this%c_Xh, dm_xh%size())
761 call makeabf%compute_fluid(this%abx1, this%aby1, this%abz1,&
762 this%abx2, this%aby2, this%abz2, &
763 f_x%x, f_y%x, f_z%x, &
764 rho%x(1,1,1,1), ext_bdf%advection_coeffs%x, n)
770 call makebdf%compute_fluid(ulag, vlag, wlag, f_x%x, f_y%x, f_z%x, &
771 u, v, w, c_xh%B, c_xh%Blag, c_xh%Blaglag, rho%x(1,1,1,1), dt, &
772 ext_bdf%diffusion_coeffs%x, ext_bdf%ndiff, n)
776 if (this%ale%active)
then
778 call this%ale%advance_mesh(c_xh, time, ext_bdf%nadv)
780 call profiler_start_region(
'ALE recompute metrics')
782 call c_xh%recompute_metrics()
785 call this%adv%recompute_metrics(c_xh, .true.)
786 call profiler_end_region(
'ALE recompute metrics')
794 call this%update_material_properties(time)
796 do iter = 1, 1 + this%schwarz_iterations
798 call this%bc_apply_vel(time, strong = .true.)
799 call this%bc_apply_prs(time)
802 call profiler_start_region(
'Pressure_residual', 18)
803 call prs_res%compute(p, p_res,&
808 this%bc_prs_surface, this%bc_sym_surface,&
809 ax_prs, ext_bdf%diffusion_coeffs%x(1), dt, &
814 if (.not. this%prs_dirichlet .and. neko_bcknd_device .eq. 1)
then
815 call device_ortho(p_res%x_d, this%glb_n_points, n)
816 else if (.not. this%prs_dirichlet)
then
817 call ortho(p_res%x, this%glb_n_points, n)
820 call gs_xh%op(p_res, gs_op_add, event)
821 call device_event_sync(event)
824 call this%bclst_dp%apply_scalar(p_res%x, p%dof%size(), time)
827 call profiler_end_region(
'Pressure_residual', 18)
831 if (iter .eq. 1)
then
832 call this%proj_prs%pre_solving(p_res%x, tstep, c_xh, n, dt_controller, &
833 ax = ax_prs, gs_h = gs_xh, bclst = this%bclst_dp, &
837 call this%pc_prs%update()
839 call profiler_start_region(
'Pressure_solve', 3)
843 this%ksp_prs%solve(ax_prs, dp, p_res%x, n, c_xh, &
844 this%bclst_dp, gs_xh)
845 ksp_results(1)%name =
'Pressure'
848 call profiler_end_region(
'Pressure_solve', 3)
850 if (iter .eq. 1)
then
851 call this%proj_prs%post_solving(dp%x, ax_prs, c_xh, &
852 this%bclst_dp, gs_xh, n, tstep, dt_controller)
856 call field_add2(p, dp, n)
857 if (.not. this%prs_dirichlet .and. neko_bcknd_device .eq. 1)
then
858 call device_ortho(p%x_d, this%glb_n_points, n)
859 else if (.not. this%prs_dirichlet)
then
860 call ortho(p%x, this%glb_n_points, n)
864 call profiler_start_region(
'Velocity_residual', 19)
865 call vel_res%compute(ax_vel, u, v, w, &
866 u_res, v_res, w_res, &
870 mu_tot, rho, ext_bdf%diffusion_coeffs%x(1), &
873 call rotate_cyc(u_res, v_res, w_res, 1, c_xh)
874 call gs_xh%op(u_res%x, v_res%x, w_res%x, dm_xh%size(), &
876 call device_event_sync(event)
877 call rotate_cyc(u_res, v_res, w_res, 0, c_xh)
880 call this%bclst_vel_res%apply(u_res, v_res, w_res, time)
883 call profiler_end_region(
'Velocity_residual', 19)
885 if (iter .eq. 1)
then
886 call this%proj_vel%pre_solving(u_res%x, v_res%x, w_res%x, &
887 tstep, c_xh, n, dt_controller,
'Velocity')
890 call this%pc_vel%update()
892 call profiler_start_region(
"Velocity_solve", 4)
893 ksp_results(2:4) = this%ksp_vel%solve_coupled(ax_vel, du, dv, dw, &
894 u_res%x, v_res%x, w_res%x, n, c_xh, &
895 this%bclst_du, this%bclst_dv, this%bclst_dw, gs_xh, &
896 this%ksp_vel%max_iter)
897 call profiler_end_region(
"Velocity_solve", 4)
898 if (this%full_stress_formulation)
then
899 ksp_results(2)%name =
'Momentum'
901 ksp_results(2)%name =
'X-Velocity'
902 ksp_results(3)%name =
'Y-Velocity'
903 ksp_results(4)%name =
'Z-Velocity'
906 if (iter .eq. 1)
then
907 call this%proj_vel%post_solving(du%x, dv%x, dw%x, ax_vel, c_xh, &
908 this%bclst_du, this%bclst_dv, this%bclst_dw, gs_xh, n, tstep, &
912 if (neko_bcknd_device .eq. 1)
then
913 call device_opadd2cm(u%x_d, v%x_d, w%x_d, &
914 du%x_d, dv%x_d, dw%x_d, 1.0_rp, n, msh%gdim)
916 call opadd2cm(u%x, v%x, w%x, du%x, dv%x, dw%x, 1.0_rp, n, msh%gdim)
919 call fluid_step_info(time, ksp_results, &
920 this%full_stress_formulation, this%strict_convergence, &
921 this%allow_stabilization, iter)
925 if (this%forced_flow_rate)
then
927 call this%vol_flow%adjust( u, v, w, p, u_res, v_res, w_res, p_res, &
928 c_xh, gs_xh, ext_bdf, rho%x(1,1,1,1), mu_tot, &
929 dt, time, this%bclst_dp, this%bclst_du, this%bclst_dv, &
930 this%bclst_dw, this%bclst_vel_res, ax_vel, ax_prs, this%ksp_prs, &
931 this%ksp_vel, this%pc_prs, this%pc_vel, this%ksp_prs%max_iter, &
932 this%ksp_vel%max_iter)
938 call this%ale%update_mesh_velocity(c_xh, time)
944 call profiler_end_region(
'Fluid', 1)
949 subroutine fluid_pnpn_setup_bcs(this, user, params)
950 class(fluid_pnpn_t),
target,
intent(inout) :: this
951 type(user_t),
target,
intent(in) :: user
952 type(json_file),
intent(inout) :: params
953 integer :: i, n_bcs, zone_index, j, zone_size, global_zone_size, ierr
954 class(bc_t),
pointer :: bc_i
955 type(json_core) :: core
956 type(json_value),
pointer :: bc_object
957 type(json_file) :: bc_subdict
958 logical :: ale_active_local, any_moving_wall, moving_
961 logical,
allocatable :: marked_zones(:)
962 integer,
allocatable :: zone_indices(:)
965 character(len=:),
allocatable :: bc_type_str
966 this%ale%has_moving_boundary = .false.
967 any_moving_wall = .false.
968 ale_active_local = .false.
969 call json_get_or_default(params, &
970 'case.fluid.ale.enabled', &
971 ale_active_local, .false.)
974 call this%bclst_vel_res%init()
975 call this%bclst_du%init()
976 call this%bclst_dv%init()
977 call this%bclst_dw%init()
978 call this%bclst_dp%init()
980 call this%bc_vel_res%init_from_components(this%c_Xh)
981 call this%bc_du%init_from_components(this%c_Xh)
982 call this%bc_dv%init_from_components(this%c_Xh)
983 call this%bc_dw%init_from_components(this%c_Xh)
984 call this%bc_dp%init_from_components(this%c_Xh)
987 call this%bc_prs_surface%init_from_components(this%c_Xh)
988 call this%bc_sym_surface%init_from_components(this%c_Xh)
991 if (params%valid_path(
'case.fluid.boundary_conditions'))
then
992 call params%info(
'case.fluid.boundary_conditions', n_children = n_bcs)
993 call params%get_core(core)
994 call params%get(
'case.fluid.boundary_conditions', bc_object, found)
999 call this%bcs_vel%init(n_bcs)
1001 allocate(marked_zones(
size(this%msh%labeled_zones)))
1002 marked_zones = .false.
1006 call json_extract_item(core, bc_object, i, bc_subdict)
1008 call json_get_or_lookup(bc_subdict,
"zone_indices", zone_indices)
1011 call json_get(bc_subdict,
"type", bc_type_str)
1013 if (trim(bc_type_str) .eq.
"no_slip")
then
1014 call json_get_or_default(bc_subdict,
"moving", moving_, .false.)
1017 this%ale%has_moving_boundary = .true.
1023 do j = 1,
size(zone_indices)
1024 zone_size = this%msh%labeled_zones(zone_indices(j))%size
1025 call mpi_allreduce(zone_size, global_zone_size, 1, &
1026 mpi_integer, mpi_max, neko_comm, ierr)
1028 if (global_zone_size .eq. 0)
then
1029 write(error_unit,
'(A, A, I0, A, A, I0, A)')
"*** ERROR ***: ",&
1030 "Zone index ", zone_indices(j), &
1031 " is invalid as this zone has 0 size, meaning it ", &
1032 "is not in the mesh. Check fluid boundary condition ", &
1037 if (marked_zones(zone_indices(j)))
then
1038 write(error_unit,
'(A, A, I0, A, A, A, A)')
"*** ERROR ***: ", &
1039 "Zone with index ", zone_indices(j), &
1040 " has already been assigned a boundary condition. ", &
1041 "Please check your boundary_conditions entry for the ", &
1042 "fluid and make sure that each zone index appears only ", &
1043 "in a single boundary condition."
1046 marked_zones(zone_indices(j)) = .true.
1051 call velocity_bc_factory(bc_i, this, bc_subdict, this%c_Xh,
user)
1055 if (
associated(bc_i))
then
1061 type is (symmetry_t)
1069 call this%bclst_vel_res%append(bc_i)
1070 call this%bc_du%mark_facets(bc_i%bc_x%marked_facet)
1071 call this%bc_dv%mark_facets(bc_i%bc_y%marked_facet)
1072 call this%bc_dw%mark_facets(bc_i%bc_z%marked_facet)
1074 call this%bcs_vel%append(bc_i)
1076 call this%bc_sym_surface%mark_facets(bc_i%marked_facet)
1077 type is (non_normal_t)
1080 call this%bclst_vel_res%append(bc_i)
1081 call this%bc_du%mark_facets(bc_i%bc_x%marked_facet)
1082 call this%bc_dv%mark_facets(bc_i%bc_y%marked_facet)
1083 call this%bc_dw%mark_facets(bc_i%bc_z%marked_facet)
1084 type is (shear_stress_t)
1086 call this%bclst_vel_res%append(bc_i%symmetry)
1087 call this%bclst_du%append(bc_i%symmetry%bc_x)
1088 call this%bclst_dv%append(bc_i%symmetry%bc_y)
1089 call this%bclst_dw%append(bc_i%symmetry%bc_z)
1091 call this%bcs_vel%append(bc_i)
1092 type is (wall_model_bc_t)
1094 call this%bclst_vel_res%append(bc_i%symmetry)
1095 call this%bclst_du%append(bc_i%symmetry%bc_x)
1096 call this%bclst_dv%append(bc_i%symmetry%bc_y)
1097 call this%bclst_dw%append(bc_i%symmetry%bc_z)
1099 call this%bcs_vel%append(bc_i)
1106 if (bc_i%strong)
then
1107 call this%bc_vel_res%mark_facets(bc_i%marked_facet)
1108 call this%bc_du%mark_facets(bc_i%marked_facet)
1109 call this%bc_dv%mark_facets(bc_i%marked_facet)
1110 call this%bc_dw%mark_facets(bc_i%marked_facet)
1112 call this%bc_prs_surface%mark_facets(bc_i%marked_facet)
1115 call this%bcs_vel%append(bc_i)
1120 if (this%ale%active .and. (.not. this%ale%has_moving_boundary))
then
1121 call neko_error(
"Case file error: ALE is active, " // &
1122 "but no moving wall was found. " // &
1123 "Use type = 'no_slip' with 'moving': true in case file.")
1127 do i = 1,
size(this%msh%labeled_zones)
1128 if ((this%msh%labeled_zones(i)%size .gt. 0) .and. &
1129 (.not. marked_zones(i)))
then
1130 write(error_unit,
'(A, A, I0)')
"*** ERROR ***: ", &
1131 "No fluid boundary condition assigned to zone ", i
1139 call this%bcs_prs%init(n_bcs)
1143 call json_extract_item(core, bc_object, i, bc_subdict)
1145 call pressure_bc_factory(bc_i, this, bc_subdict, this%c_Xh,
user)
1149 if (
associated(bc_i))
then
1150 call this%bcs_prs%append(bc_i)
1153 if (bc_i%strong)
then
1154 call this%bc_dp%mark_facets(bc_i%marked_facet)
1162 do i = 1,
size(this%msh%labeled_zones)
1163 if (this%msh%labeled_zones(i)%size .gt. 0)
then
1164 call neko_error(
"No boundary_conditions entry in the case file!")
1170 call this%bcs_vel%init()
1171 call this%bcs_prs%init()
1175 call this%bc_prs_surface%finalize()
1176 call this%bc_sym_surface%finalize()
1178 call this%bc_vel_res%finalize()
1179 call this%bc_du%finalize()
1180 call this%bc_dv%finalize()
1181 call this%bc_dw%finalize()
1182 call this%bc_dp%finalize()
1184 call this%bclst_vel_res%append(this%bc_vel_res)
1185 call this%bclst_du%append(this%bc_du)
1186 call this%bclst_dv%append(this%bc_dv)
1187 call this%bclst_dw%append(this%bc_dw)
1188 call this%bclst_dp%append(this%bc_dp)
1191 this%prs_dirichlet = .not. this%bclst_dp%is_empty()
1192 call mpi_allreduce(mpi_in_place, this%prs_dirichlet, 1, &
1193 mpi_logical, mpi_lor, neko_comm)
1196 if (
allocated(marked_zones))
then
1197 deallocate(marked_zones)
1200 if (
allocated(zone_indices))
then
1201 deallocate(zone_indices)
1204 nullify(bc_i, bc_object)
1209 subroutine fluid_pnpn_write_boundary_conditions(this)
1216 class(fluid_pnpn_t),
target,
intent(inout) :: this
1217 type(dirichlet_t) :: bdry_mask
1218 type(field_t),
pointer :: bdry_field
1219 type(file_t) :: bdry_file
1220 integer :: temp_index, i
1221 class(bc_t),
pointer :: bci
1222 character(len=LOG_SIZE) :: log_buf
1224 write(log_buf,
'(A)')
'Marking using integer keys in bdry0.f00000'
1225 call neko_log%message(log_buf)
1226 write(log_buf,
'(A)')
'Condition-value pairs: '
1227 call neko_log%message(log_buf)
1228 write(log_buf,
'(A)')
' no_slip (stationary wall) = 1'
1229 call neko_log%message(log_buf)
1230 write(log_buf,
'(A)')
' velocity_value = 2'
1231 call neko_log%message(log_buf)
1232 write(log_buf,
'(A)')
' outflow, normal_outflow (+dong) = 3'
1233 call neko_log%message(log_buf)
1234 write(log_buf,
'(A)')
' symmetry = 4'
1235 call neko_log%message(log_buf)
1236 write(log_buf,
'(A)')
' periodic = 6'
1237 call neko_log%message(log_buf)
1238 write(log_buf,
'(A)')
' user_velocity = 7'
1239 call neko_log%message(log_buf)
1240 write(log_buf,
'(A)')
' user_pressure = 8'
1241 call neko_log%message(log_buf)
1242 write(log_buf,
'(A)')
' shear_stress = 9'
1243 call neko_log%message(log_buf)
1244 write(log_buf,
'(A)')
' wall_modelling = 10'
1245 call neko_log%message(log_buf)
1246 write(log_buf,
'(A)')
' blasius_profile = 11'
1247 call neko_log%message(log_buf)
1248 write(log_buf,
'(A)')
' no_slip (moving wall) = 12'
1249 call neko_log%message(log_buf)
1251 call neko_scratch_registry%request_field(bdry_field, temp_index, .true.)
1255 call bdry_mask%init_from_components(this%c_Xh, 6.0_rp)
1256 call bdry_mask%mark_zone(this%msh%periodic)
1257 call bdry_mask%finalize()
1258 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1259 call bdry_mask%free()
1261 do i = 1, this%bcs_prs%size()
1262 bci => this%bcs_prs%get(i)
1263 select type (
bc => bci)
1264 type is (zero_dirichlet_t)
1265 call bdry_mask%init_from_components(this%c_Xh, 3.0_rp)
1266 call bdry_mask%mark_facets(bci%marked_facet)
1267 call bdry_mask%finalize()
1268 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1269 call bdry_mask%free()
1271 call bdry_mask%init_from_components(this%c_Xh, 3.0_rp)
1272 call bdry_mask%mark_facets(bci%marked_facet)
1273 call bdry_mask%finalize()
1274 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1275 call bdry_mask%free()
1277 call bdry_mask%init_from_components(this%c_Xh, 8.0_rp)
1278 call bdry_mask%mark_facets(bci%marked_facet)
1279 call bdry_mask%finalize()
1280 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1281 call bdry_mask%free()
1285 do i = 1, this%bcs_vel%size()
1286 bci => this%bcs_vel%get(i)
1287 select type (
bc => bci)
1289 if (
bc%is_moving)
then
1291 call bdry_mask%init_from_components(this%c_Xh, 12.0_rp)
1294 call bdry_mask%init_from_components(this%c_Xh, 1.0_rp)
1296 call bdry_mask%mark_facets(bci%marked_facet)
1297 call bdry_mask%finalize()
1298 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1299 call bdry_mask%free()
1301 call bdry_mask%init_from_components(this%c_Xh, 2.0_rp)
1302 call bdry_mask%mark_facets(bci%marked_facet)
1303 call bdry_mask%finalize()
1304 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1305 call bdry_mask%free()
1306 type is (symmetry_t)
1307 call bdry_mask%init_from_components(this%c_Xh, 4.0_rp)
1308 call bdry_mask%mark_facets(bci%marked_facet)
1309 call bdry_mask%finalize()
1310 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1311 call bdry_mask%free()
1313 call bdry_mask%init_from_components(this%c_Xh, 7.0_rp)
1314 call bdry_mask%mark_facets(bci%marked_facet)
1315 call bdry_mask%finalize()
1316 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1317 call bdry_mask%free()
1318 type is (shear_stress_t)
1319 call bdry_mask%init_from_components(this%c_Xh, 9.0_rp)
1320 call bdry_mask%mark_facets(bci%marked_facet)
1321 call bdry_mask%finalize()
1322 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1323 call bdry_mask%free()
1324 type is (wall_model_bc_t)
1325 call bdry_mask%init_from_components(this%c_Xh, 10.0_rp)
1326 call bdry_mask%mark_facets(bci%marked_facet)
1327 call bdry_mask%finalize()
1328 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1329 call bdry_mask%free()
1331 call bdry_mask%init_from_components(this%c_Xh, 11.0_rp)
1332 call bdry_mask%mark_facets(bci%marked_facet)
1333 call bdry_mask%finalize()
1334 call bdry_mask%apply_scalar(bdry_field%x, this%dm_Xh%size())
1335 call bdry_mask%free()
1340 call bdry_file%init(
'bdry.fld')
1341 call bdry_file%write(bdry_field)
1343 call neko_scratch_registry%relinquish_field(temp_index)
1345 nullify(bdry_field, bci)